Sequence Similarity Clusters for the Entities in PDB 1FSX

Entity #1 | Chains: A,C
HEMOGLOBIN ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 162 254 12
95 % 170 265 16 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 170 265 17
70 % 193 332 17
50 % 456 754 4
40 % 461 759 7
30 % 916 1294 6
Entity #2 | Chains: B,D
HEMOGLOBIN BETA CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 2569
95 % 8 12 2686 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 8 16 1753
70 % 208 346 14
50 % 457 754 4
40 % 462 759 7
30 % 917 1294 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures