Sequence Similarity Clusters for the Entities in PDB 1FSX

Entity #1 | Chains: A,C
HEMOGLOBIN ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 2179
95 % 7 11 2825 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 8 16 1650
70 % 189 326 15
50 % 448 742 4
40 % 453 747 7
30 % 866 1190 8
Entity #2 | Chains: B,D
HEMOGLOBIN BETA CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 2177
95 % 8 12 2554 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 8 16 1649
70 % 204 340 13
50 % 449 742 4
40 % 454 747 7
30 % 867 1190 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.