Sequence Similarity Clusters for the Entities in PDB 1FSS

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 537 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 96 97 267
95 % 96 97 343 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 96 97 362
70 % 96 97 404
50 % 253 259 106
40 % 256 262 128
30 % 338 353 71
Entity #2 | Chains: B
FASCICULIN II protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 9 8094
95 % 10 10 7273
90 % 10 10 7229
70 % 11 11 6282
50 % 24 38 1382
40 % 56 126 325
30 % 61 134 302

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1FAS 1 A FASCICULIN 1 8618
2 1FSC 1 A FASCICULIN 2 8618
3 4EY8 2 B Fasciculin-2 8618
4 1KU6 2 B FASCICULIN 2 8618
5 4BDT 2 B FASCICULIN-2 8618
6 1F8U 2 B FASCICULIN II 8618
7 2X8B 2 B FASCICULIN-2 8618
8 1B41 2 B FASCICULIN-2 SINGLE DOMAIN 8618
9 1MAH 2 F FASCICULIN 2 8618
10 1FSS 2 B FASCICULIN II 8618