Sequence Similarity Clusters for the Entities in PDB 1FSS

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 537 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 90 91 271
95 % 91 92 367 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 91 92 394
70 % 91 92 433
50 % 246 251 105
40 % 246 251 129
30 % 329 343 73
Entity #2 | Chains: B
FASCICULIN II protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 9 7699
95 % 10 10 7583
90 % 10 10 7532
70 % 11 11 6481
50 % 24 37 1394
40 % 55 124 313
30 % 56 126 312

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1FAS 1 A FASCICULIN 1 8618
2 1FSC 1 A FASCICULIN 2 8618
3 4EY8 2 B Fasciculin-2 8618
4 1KU6 2 B FASCICULIN 2 8618
5 4BDT 2 B FASCICULIN-2 8618
6 1F8U 2 B FASCICULIN II 8618
7 2X8B 2 B FASCICULIN-2 8618
8 1B41 2 B FASCICULIN-2 SINGLE DOMAIN 8618
9 1MAH 2 F FASCICULIN 2 8618
10 1FSS 2 B FASCICULIN II 8618