Sequence Similarity Clusters for the Entities in PDB 1FSS

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 537 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 107 108 247
95 % 107 108 321 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 107 108 333
70 % 107 108 384
50 % 268 274 107
40 % 271 277 127
30 % 353 368 83
Entity #2 | Chains: B
FASCICULIN II protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 8500
95 % 10 10 7633 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 10 10 7570
70 % 11 11 6572
50 % 24 38 1445
40 % 56 126 365
30 % 61 134 322

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1FAS 1 A FASCICULIN 1 8618
2 1FSC 1 A FASCICULIN 2 8618
3 4EY8 2 B Fasciculin-2 8618
4 1KU6 2 B FASCICULIN 2 8618
5 4BDT 2 B FASCICULIN-2 8618
6 1F8U 2 B FASCICULIN II 8618
7 2X8B 2 B FASCICULIN-2 8618
8 1B41 2 B FASCICULIN-2 SINGLE DOMAIN 8618
9 1MAH 2 F FASCICULIN 2 8618
10 1FSS 2 B FASCICULIN II 8618