Sequence Similarity Clusters for the Entities in PDB 1FSS

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 537 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 97 98 271
95 % 97 98 350 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 97 98 371
70 % 97 98 413
50 % 254 260 108
40 % 257 263 128
30 % 339 354 76
Entity #2 | Chains: B
FASCICULIN II protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 8290
95 % 10 10 7424 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 10 10 7378
70 % 11 11 6409
50 % 24 38 1407
40 % 56 126 346
30 % 61 134 310

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1FAS 1 A FASCICULIN 1 8618
2 1FSC 1 A FASCICULIN 2 8618
3 4EY8 2 B Fasciculin-2 8618
4 1KU6 2 B FASCICULIN 2 8618
5 4BDT 2 B FASCICULIN-2 8618
6 1F8U 2 B FASCICULIN II 8618
7 2X8B 2 B FASCICULIN-2 8618
8 1B41 2 B FASCICULIN-2 SINGLE DOMAIN 8618
9 1MAH 2 F FASCICULIN 2 8618
10 1FSS 2 B FASCICULIN II 8618