Sequence Similarity Clusters for the Entities in PDB 1FSS

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 537 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 109 110 247
95 % 109 110 316 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 109 110 327
70 % 109 110 375
50 % 280 287 103
40 % 283 290 121
30 % 365 381 77
Entity #2 | Chains: B
FASCICULIN II protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 8706
95 % 10 10 7809 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 10 10 7742
70 % 11 11 6715
50 % 25 39 1382
40 % 57 127 381
30 % 62 135 338

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures