Sequence Similarity Clusters for the Entities in PDB 1FSS

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 537 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 91 92 285
95 % 91 92 369 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 91 92 393
70 % 91 92 432
50 % 246 251 108
40 % 249 254 129
30 % 331 345 74
Entity #2 | Chains: B
FASCICULIN II protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 9 7854
95 % 10 10 7081
90 % 10 10 7036
70 % 11 11 6125
50 % 24 38 1345
40 % 56 125 315
30 % 61 133 295

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures