Sequence Similarity Clusters for the Entities in PDB 1FSS

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 537 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 104 105 254
95 % 104 105 333 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 104 105 347
70 % 104 105 388
50 % 262 268 108
40 % 265 271 128
30 % 347 362 75
Entity #2 | Chains: B
FASCICULIN II protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 8436
95 % 10 10 7575 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 10 10 7517
70 % 11 11 6532
50 % 24 38 1437
40 % 56 126 362
30 % 61 134 318

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures