Sequence Similarity Clusters for the Entities in PDB 1FSK

Entity #1 | Chains: A,D,G,J
MAJOR POLLEN ALLERGEN BET V 1-A protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 12564
95 % 23 26 1421
90 % 24 27 1374
70 % 24 27 1403
50 % 42 50 636
40 % 51 59 434
30 % 55 63 395
Entity #2 | Chains: B,E,H,K
IMMUNOGLOBULIN KAPPA LIGHT CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 19948
95 % 7 8 4161
90 % 49 65 419
70 % 1498 1765 2
50 % 3660 4337 1
40 % 3660 4337 1
30 % 4317 5109 1
Entity #3 | Chains: C,F,I,L
ANTIBODY HEAVY CHAIN FAB protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 19734
95 % 1 1 17219
90 % 1 1 16848
70 % 1767 2096 1
50 % 3661 4337 1
40 % 3661 4337 1
30 % 4318 5109 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.