Sequence Similarity Clusters for the Entities in PDB 1FSK

Entity #1 | Chains: A,D,G,J
MAJOR POLLEN ALLERGEN BET V 1-A protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 12397
95 % 23 26 1390
90 % 24 27 1353
70 % 24 27 1380
50 % 42 49 626
40 % 51 58 424
30 % 55 62 371
Entity #2 | Chains: B,E,H,K
IMMUNOGLOBULIN KAPPA LIGHT CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 19629
95 % 6 7 4391
90 % 46 62 426
70 % 1468 1729 2
50 % 3558 4220 1
40 % 3559 4221 1
30 % 4195 4972 1
Entity #3 | Chains: C,F,I,L
ANTIBODY HEAVY CHAIN FAB protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 19418
95 % 1 1 16958
90 % 1 1 16596
70 % 1719 2041 1
50 % 3559 4220 1
40 % 3560 4221 1
30 % 4196 4972 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.