Sequence Similarity Clusters for the Entities in PDB 1FS2

Entity #1 | Chains: A,C
SKP2 protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37567
95 % 1 1 29276 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 28260
70 % 1 1 25511
50 % 1 1 21843
40 % 1 1 19260
30 % 1 1 16352
Entity #2 | Chains: B,D
SKP1 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15718
95 % 9 11 4843 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.7
PDBFlex
90 % 9 11 4861
70 % 16 19 1967
50 % 28 35 765
40 % 28 35 798
30 % 28 35 789

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.