Sequence Similarity Clusters for the Entities in PDB 1FS2

Entity #1 | Chains: A,C
SKP2 protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38124
95 % 1 1 29704 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 28664
70 % 1 1 25850
50 % 1 1 22137
40 % 1 1 19509
30 % 1 1 16562
Entity #2 | Chains: B,D
SKP1 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15984
95 % 9 11 4924 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.7
PDBFlex
90 % 9 11 4945
70 % 18 21 1701
50 % 30 38 723
40 % 30 38 752
30 % 30 38 750

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures