Sequence Similarity Clusters for the Entities in PDB 1FS2

Entity #1 | Chains: A,C
SKP2 protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31878
95 % 1 1 27609 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 26564
70 % 3 4 5574
50 % 3 4 5658
40 % 3 4 5288
30 % 3 4 4419
Entity #2 | Chains: B,D
SKP1 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16543
95 % 9 11 5125 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.7
PDBFlex
90 % 9 11 5151
70 % 18 21 1793
50 % 30 38 739
40 % 30 38 776
30 % 30 38 774

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures