Sequence Similarity Clusters for the Entities in PDB 1FS2

Entity #1 | Chains: A,C
SKP2 protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38878
95 % 1 1 30247 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 29170
70 % 1 1 26285
50 % 1 1 22482
40 % 1 1 19806
30 % 1 1 16807
Entity #2 | Chains: B,D
SKP1 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16366
95 % 9 11 5044 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.7
PDBFlex
90 % 9 11 5068
70 % 18 21 1749
50 % 30 38 731
40 % 30 38 762
30 % 30 38 762

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures