Sequence Similarity Clusters for the Entities in PDB 1FS2

Entity #1 | Chains: A,C
SKP2 protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36455
95 % 1 1 28426 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 27450
70 % 1 1 24864
50 % 1 1 21344
40 % 1 1 18814
30 % 1 1 15966
Entity #2 | Chains: B,D
SKP1 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15232
95 % 9 11 4659 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.7
PDBFlex
90 % 9 11 4678
70 % 15 18 1994
50 % 27 34 750
40 % 27 34 777
30 % 27 34 769

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.