Sequence Similarity Clusters for the Entities in PDB 1FS1

Entity #1 | Chains: A,C
CYCLIN A/CDK2-ASSOCIATED P19 protein, length: 53 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49122
95 % 1 1 36710 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 35043
70 % 1 1 31147
50 % 1 1 26630
40 % 1 1 23509
30 % 1 1 19962
Entity #2 | Chains: B,D
CYCLIN A/CDK2-ASSOCIATED P45 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15802
95 % 1 11 4877 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.7
PDBFlex
90 % 1 11 4899
70 % 1 19 1981
50 % 4 36 754
40 % 4 36 792
30 % 4 36 785

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures