Sequence Similarity Clusters for the Entities in PDB 1FS1

Entity #1 | Chains: A,C
CYCLIN A/CDK2-ASSOCIATED P19 protein, length: 53 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41871
95 % 1 1 35165 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 33607
70 % 1 1 29950
50 % 1 1 25543
40 % 1 1 22419
30 % 1 1 18695
Entity #2 | Chains: B,D
CYCLIN A/CDK2-ASSOCIATED P45 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16471
95 % 1 11 5111 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.7
PDBFlex
90 % 1 11 5136
70 % 1 21 1774
50 % 4 38 737
40 % 4 38 775
30 % 4 38 771

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures