Sequence Similarity Clusters for the Entities in PDB 1FRV

Entity #1 | Chains: A,C
HYDROGENASE protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39241
95 % 3 3 7198 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 3 7185
70 % 3 3 6992
50 % 47 47 515
40 % 62 62 456
30 % 62 62 453
Entity #2 | Chains: B,D
HYDROGENASE protein, length: 536 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32750
95 % 3 3 6849 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 3 3 6836
70 % 3 3 6653
50 % 42 42 592
40 % 71 71 405
30 % 89 89 319

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures