Sequence Similarity Clusters for the Entities in PDB 1FRV

Entity #1 | Chains: A,C
HYDROGENASE protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38771
95 % 3 3 7102 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 3 7084
70 % 3 3 6898
50 % 47 47 511
40 % 59 59 468
30 % 59 59 462
Entity #2 | Chains: B,D
HYDROGENASE protein, length: 536 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32361
95 % 3 3 6754 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 3 3 6733
70 % 3 3 6559
50 % 42 42 587
40 % 68 68 420
30 % 86 86 331

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures