Sequence Similarity Clusters for the Entities in PDB 1FRV

Entity #1 | Chains: A,C
HYDROGENASE protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37957
95 % 3 3 6953 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 3 6934
70 % 3 3 6762
50 % 47 47 499
40 % 59 59 459
30 % 59 59 458
Entity #2 | Chains: B,D
HYDROGENASE protein, length: 536 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31676
95 % 3 3 6622 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 3 3 6598
70 % 3 3 6436
50 % 42 42 574
40 % 65 65 400
30 % 83 83 327

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.