Sequence Similarity Clusters for the Entities in PDB 1FRV

Entity #1 | Chains: A,C
HYDROGENASE protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36811
95 % 3 3 6724 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 3 6709
70 % 3 3 6527
50 % 47 47 485
40 % 59 59 441
30 % 59 59 440
Entity #2 | Chains: B,D
HYDROGENASE protein, length: 536 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30637
95 % 3 3 6410 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 3 6390
70 % 3 3 6218
50 % 42 42 553
40 % 63 63 402
30 % 81 81 326

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.