Sequence Similarity Clusters for the Entities in PDB 1FRT

Entity #1 | Chains: A
NEONATAL FC RECEPTOR protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 16758
95 % 3 3 15550 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 3 3 15228
70 % 3 3 14259
50 % 12 12 2230
40 % 12 12 2210
30 % 929 930 12
Entity #2 | Chains: B
BETA 2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 8350
95 % 6 6 8404 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 6 6 8328
70 % 938 944 4
50 % 960 966 3
40 % 960 966 6
30 % 960 966 9
Entity #3 | Chains: C
IGG FC protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 15 1412
95 % 159 165 114 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.4
PDBFlex
90 % 168 174 109
70 % 169 175 121
50 % 180 186 139
40 % 180 186 153
30 % 6828 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures