Sequence Similarity Clusters for the Entities in PDB 1FRT

Entity #1 | Chains: A
NEONATAL FC RECEPTOR protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14924
95 % 3 3 14070 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 3 3 13852
70 % 3 3 13043
50 % 12 12 2082
40 % 12 12 2080
30 % 880 881 15
Entity #2 | Chains: B
BETA 2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 7400
95 % 6 6 7967 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 6 6 7923
70 % 893 898 4
50 % 915 920 3
40 % 915 920 8
30 % 915 920 12
Entity #3 | Chains: C
IGG FC protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 14 1221
95 % 150 155 108 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.5
PDBFlex
90 % 159 164 88
70 % 160 165 104
50 % 169 174 139
40 % 169 174 150
30 % 5314 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.