Sequence Similarity Clusters for the Entities in PDB 1FRT

Entity #1 | Chains: A
NEONATAL FC RECEPTOR protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 15130
95 % 3 3 14250 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 3 3 14026
70 % 3 3 13196
50 % 12 12 2119
40 % 12 12 2115
30 % 898 899 15
Entity #2 | Chains: B
BETA 2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 7507
95 % 6 6 8073 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 6 6 8021
70 % 910 916 4
50 % 932 938 3
40 % 932 938 7
30 % 932 938 12
Entity #3 | Chains: C
IGG FC protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 14 1250
95 % 155 160 95 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.4
PDBFlex
90 % 164 169 89
70 % 165 170 106
50 % 174 179 140
40 % 174 179 152
30 % 5482 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures