Sequence Similarity Clusters for the Entities in PDB 1FRT

Entity #1 | Chains: A
NEONATAL FC RECEPTOR protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14683
95 % 3 3 13843 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 3 3 13621
70 % 3 3 12800
50 % 10 10 2320
40 % 10 10 2302
30 % 855 856 15
Entity #2 | Chains: B
BETA 2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 7301
95 % 6 6 7847
90 % 6 6 7805
70 % 870 875 4
50 % 892 897 4
40 % 892 897 9
30 % 892 897 14
Entity #3 | Chains: C
IGG FC protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 14 1204
95 % 142 147 114 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.5
PDBFlex
90 % 148 153 114
70 % 149 154 127
50 % 156 161 145
40 % 156 161 161
30 % 5245 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.