Sequence Similarity Clusters for the Entities in PDB 1FRG

Entity #1 | Chains: L
IGG2A 26/9 FAB (LIGHT CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61479
95 % 6 13 3833 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 2.4
PDBFlex
90 % 56 84 303
70 % 1438 2416 1
50 % 2926 4892 1
40 % 2926 4892 1
30 % 3369 5759 1
Entity #2 | Chains: H
IGG2A 26/9 FAB (HEAVY CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61142
95 % 1 1 42955
90 % 7 15 2453
70 % 1413 2366 2
50 % 2927 4892 1
40 % 2927 4892 1
30 % 3370 5759 1
Entity #3 | Chains: P
INFLUENZA HEMAGGLUTININ HA1 (STRAIN X47) (RESIDUES 101 - 108) protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures