Sequence Similarity Clusters for the Entities in PDB 1FRG

Entity #1 | Chains: L
IGG2A 26/9 FAB (LIGHT CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50111
95 % 6 13 4025 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 2.4
PDBFlex
90 % 60 91 270
70 % 1502 2538 1
50 % 3065 5152 1
40 % 3492 5806 1
30 % 4303 7240 1
Entity #2 | Chains: H
IGG2A 26/9 FAB (HEAVY CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50110
95 % 1 1 41472
90 % 7 16 2332
70 % 1480 2497 2
50 % 3066 5152 1
40 % 3493 5806 1
30 % 4304 7240 1
Entity #3 | Chains: P
INFLUENZA HEMAGGLUTININ HA1 (STRAIN X47) (RESIDUES 101 - 108) protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures