Sequence Similarity Clusters for the Entities in PDB 1FRG

Entity #1 | Chains: L
IGG2A 26/9 FAB (LIGHT CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62274
95 % 6 13 3887 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 2.4
PDBFlex
90 % 56 84 308
70 % 1476 2474 1
50 % 3004 5011 1
40 % 3004 5011 1
30 % 3497 5941 1
Entity #2 | Chains: H
IGG2A 26/9 FAB (HEAVY CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61936
95 % 1 1 43482
90 % 7 15 2500
70 % 1451 2424 2
50 % 3005 5011 1
40 % 3005 5011 1
30 % 3498 5941 1
Entity #3 | Chains: P
INFLUENZA HEMAGGLUTININ HA1 (STRAIN X47) (RESIDUES 101 - 108) protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures