Sequence Similarity Clusters for the Entities in PDB 1FRF

Entity #1 | Chains: S
[NI-FE] HYDROGENASE protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55974
95 % 20 20 794 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 20 20 827
70 % 20 20 868
50 % 46 47 485
40 % 58 59 441
30 % 58 59 440
Entity #2 | Chains: L
[NI-FE] HYDROGENASE protein, length: 564 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49510
95 % 20 20 790 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 20 20 823
70 % 20 20 865
50 % 41 42 553
40 % 61 63 402
30 % 79 81 326

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.