Sequence Similarity Clusters for the Entities in PDB 1FRF

Entity #1 | Chains: S
[NI-FE] HYDROGENASE protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 14 969
95 % 20 20 856 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 20 20 886
70 % 20 20 922
50 % 46 47 517
40 % 61 62 466
30 % 80 82 361
Entity #2 | Chains: L
[NI-FE] HYDROGENASE protein, length: 564 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48804
95 % 20 20 854 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 20 20 885
70 % 20 20 920
50 % 66 68 399
40 % 69 71 416
30 % 95 97 296

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures