Sequence Similarity Clusters for the Entities in PDB 1FQV

Entity #1 | Chains: A,C,E,G,I,K,M,O
SKP2 protein, length: 336 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 5632
95 % 3 3 6238
90 % 3 3 6234
70 % 3 3 6095
50 % 3 3 5697
40 % 3 3 5335
30 % 3 3 4793
Entity #2 | Chains: B,D,F,H,J,L,N,P
SKP1 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 3997
95 % 7 7 4119
90 % 7 7 4142
70 % 15 17 1967
50 % 29 33 701
40 % 29 33 743
30 % 29 33 739

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.