Sequence Similarity Clusters for the Entities in PDB 1FQV

Entity #1 | Chains: A,C,E,G,I,K,M,O
SKP2 protein, length: 336 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 6070
95 % 3 3 6708
90 % 3 3 6691
70 % 3 3 6538
50 % 3 3 6080
40 % 3 3 5682
30 % 3 3 5095
Entity #2 | Chains: B,D,F,H,J,L,N,P
SKP1 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 4287
95 % 8 8 4143
90 % 8 8 4172
70 % 17 19 1942
50 % 31 35 755
40 % 31 35 787
30 % 31 35 781

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.