Sequence Similarity Clusters for the Entities in PDB 1FQV

Entity #1 | Chains: A,C,E,G,I,K,M,O
SKP2 protein, length: 336 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 5748
95 % 3 3 6356
90 % 3 3 6347
70 % 3 3 6191
50 % 3 3 5784
40 % 3 3 5411
30 % 3 3 4858
Entity #2 | Chains: B,D,F,H,J,L,N,P
SKP1 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 4075
95 % 7 7 4199
90 % 7 7 4218
70 % 16 18 1933
50 % 30 34 717
40 % 30 34 753
30 % 30 34 748

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.