Sequence Similarity Clusters for the Entities in PDB 1FQK

Entity #1 | Chains: A,C
Guanine nucleotide-binding protein G(t) subunit alpha-1,Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(t) subunit alpha-1 protein, length: 325 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14998
95 % 3 4 8783 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.3
PDBFlex
90 % 6 7 4446
70 % 35 66 408
50 % 36 77 436
40 % 38 97 384
30 % 39 99 372
Entity #2 | Chains: B,D
Regulator of G-protein signaling 9 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 15946
95 % 3 3 14896 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 3 3 14627
70 % 3 3 13726
50 % 3 3 12198
40 % 14 28 1298
30 % 16 33 1154

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures