Sequence Similarity Clusters for the Entities in PDB 1FQK

Entity #1 | Chains: A,C
Guanine nucleotide-binding protein G(t) subunit alpha-1,Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(t) subunit alpha-1 protein, length: 325 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14321
95 % 3 4 8408 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.8
PDBFlex
90 % 6 7 4253
70 % 35 66 393
50 % 36 77 410
40 % 38 97 345
30 % 39 99 336
Entity #2 | Chains: B,D
Regulator of G-protein signaling 9 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 15214
95 % 3 3 14259 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 3 3 13987
70 % 3 3 13122
50 % 3 3 11683
40 % 14 28 1248
30 % 16 33 1102

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.