Sequence Similarity Clusters for the Entities in PDB 1FQJ

Entity #1 | Chains: A,D
CHIMERA OF GUANINE NUCLEOTIDE-BINDING PROTEIN G(T), ALPHA-1 SUBUNIT AND GUANINE NUCLEOTIDE-BINDING PROTEIN G(I), ALPHA-1 SUBUNIT protein, length: 325 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 13666
95 % 2 4 7973
90 % 5 7 4055
70 % 20 66 373
50 % 20 77 364
40 % 20 95 325
30 % 20 97 319
Entity #2 | Chains: B,E
REGULATOR OF G-PROTEIN SIGNALING 9 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 14471
95 % 2 3 13587
90 % 2 3 13341
70 % 2 3 12516
50 % 2 3 11194
40 % 10 28 1202
30 % 12 33 1059
Entity #3 | Chains: C
RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE GAMMA-SUBUNIT protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68807
95 % 1 1 47841
90 % 1 1 45515
70 % 1 1 40114
50 % 1 1 34355
40 % 1 1 30275
30 % 1 1 25594

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.