Sequence Similarity Clusters for the Entities in PDB 1FQJ

Entity #1 | Chains: A,D
CHIMERA OF GUANINE NUCLEOTIDE-BINDING PROTEIN G(T), ALPHA-1 SUBUNIT AND GUANINE NUCLEOTIDE-BINDING PROTEIN G(I), ALPHA-1 SUBUNIT protein, length: 325 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 13845
95 % 2 4 8098
90 % 5 7 4114
70 % 20 66 384
50 % 20 77 388
40 % 20 95 329
30 % 20 97 325
Entity #2 | Chains: B,E
REGULATOR OF G-PROTEIN SIGNALING 9 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 14691
95 % 2 3 13789
90 % 2 3 13535
70 % 2 3 12698
50 % 2 3 11350
40 % 10 28 1220
30 % 12 33 1077
Entity #3 | Chains: C
RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE GAMMA-SUBUNIT protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69776
95 % 1 1 48521
90 % 1 1 46145
70 % 1 1 40641
50 % 1 1 34806
40 % 1 1 30681
30 % 1 1 25954

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.