Sequence Similarity Clusters for the Entities in PDB 1FQ9

Entity #1 | Chains: A,B
FIBROBLAST GROWTH FACTOR 2 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 15 1699
95 % 17 20 1796 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.4
PDBFlex
90 % 17 20 1836
70 % 17 20 1862
50 % 100 125 171
40 % 101 126 185
30 % 102 127 197
Entity #2 | Chains: C,D
FIBROBLAST GROWTH FACTOR RECEPTOR 1 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 10692
95 % 5 6 7192 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 5 6 7170
70 % 13 16 1841
50 % 13 16 1880
40 % 13 16 1887
30 % 13 16 1818

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures