Sequence Similarity Clusters for the Entities in PDB 1FQ9

Entity #1 | Chains: A,B
FIBROBLAST GROWTH FACTOR 2 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 7649
95 % 18 21 1718 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.4
PDBFlex
90 % 18 21 1753
70 % 18 21 1762
50 % 117 142 167
40 % 118 143 179
30 % 119 144 197
Entity #2 | Chains: C,D
FIBROBLAST GROWTH FACTOR RECEPTOR 1 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 13247
95 % 5 6 7260 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 5 6 7228
70 % 13 16 1930
50 % 13 16 1963
40 % 13 16 1942
30 % 37 44 681

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures