Sequence Similarity Clusters for the Entities in PDB 1FQ8

Entity #1 | Chains: A
SACCHAROPEPSIN protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 10 6154
95 % 10 11 5867 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 10 11 5855
70 % 10 11 5718
50 % 10 11 5391
40 % 103 128 229
30 % 696 738 30

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures