Sequence Similarity Clusters for the Entities in PDB 1FPT

Entity #1 | Chains: P
FAB FRAGMENT OF AN NEUTRALIZING ANTIBODY FOR TYPE 1 POLIOVIRUS protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: L
IGG2A-KAPPA C3 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27255
95 % 139 145 147
90 % 149 155 149
70 % 1836 2280 1
50 % 3725 4619 1
40 % 3725 4619 1
30 % 4399 5440 1
Entity #3 | Chains: H
IGG2A-KAPPA C3 FAB (HEAVY CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27224
95 % 1 3 22719
90 % 2 4 17637
70 % 1802 2238 2
50 % 3726 4619 1
40 % 3726 4619 1
30 % 4400 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.