Sequence Similarity Clusters for the Entities in PDB 1FPS

Entity #1 | Chains: A
FARNESYL DIPHOSPHATE SYNTHASE protein, length: 348 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63117
95 % 1 5 15604 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 5 15279
70 % 1 5 14298
50 % 69 86 636
40 % 96 123 379
30 % 103 136 268

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures