Sequence Similarity Clusters for the Entities in PDB 1FP4

Entity #1 | Chains: A,C
NITROGENASE MOLYBDENUM-IRON PROTEIN ALPHA CHAIN protein, length: 492 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34124
95 % 22 27 802 Flexibility: No
Max RMSD: 2.6, Avg RMSD: 0.4
PDBFlex
90 % 22 27 830
70 % 27 33 702
50 % 27 33 760
40 % 27 33 789
30 % 33 41 625
Entity #2 | Chains: B,D
NITROGENASE MOLYBDENUM-IRON PROTEIN BETA CHAIN protein, length: 523 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 27 650
95 % 22 27 796 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 22 27 824
70 % 22 27 869
50 % 27 33 756
40 % 27 33 785
30 % 27 33 794

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures