Sequence Similarity Clusters for the Entities in PDB 1FP4

Entity #1 | Chains: A,C
NITROGENASE MOLYBDENUM-IRON PROTEIN ALPHA CHAIN protein, length: 492 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34785
95 % 22 27 816 Flexibility: No
Max RMSD: 2.6, Avg RMSD: 0.4
PDBFlex
90 % 22 27 849
70 % 27 33 737
50 % 27 33 785
40 % 27 33 814
30 % 33 41 644
Entity #2 | Chains: B,D
NITROGENASE MOLYBDENUM-IRON PROTEIN BETA CHAIN protein, length: 523 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 27 668
95 % 22 27 810 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 22 27 842
70 % 22 27 891
50 % 27 33 781
40 % 27 33 808
30 % 27 33 809

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures