Sequence Similarity Clusters for the Entities in PDB 1FP4

Entity #1 | Chains: A,C
NITROGENASE MOLYBDENUM-IRON PROTEIN ALPHA CHAIN protein, length: 492 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33229
95 % 22 27 772 Flexibility: No
Max RMSD: 2.6, Avg RMSD: 0.4
PDBFlex
90 % 22 27 797
70 % 27 33 684
50 % 27 33 740
40 % 27 33 769
30 % 33 41 612
Entity #2 | Chains: B,D
NITROGENASE MOLYBDENUM-IRON PROTEIN BETA CHAIN protein, length: 523 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 27 625
95 % 22 27 766 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 22 27 791
70 % 22 27 839
50 % 27 33 738
40 % 27 33 765
30 % 27 33 774

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures