Sequence Similarity Clusters for the Entities in PDB 1FOE

Entity #1 | Chains: A,C,E,G
T-LYMPHOMA INVASION AND METASTASIS INDUCING PROTEIN 1 protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17824
95 % 1 1 16070 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.7
PDBFlex
90 % 1 1 15749
70 % 1 1 14689
50 % 1 1 12935
40 % 1 1 11652
30 % 1 1 10087
Entity #2 | Chains: B,D,F,H
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 13 1912
95 % 35 38 644 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.3
PDBFlex
90 % 37 40 623
70 % 66 78 313
50 % 120 137 186
40 % 121 138 202
30 % 664 768 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.