Sequence Similarity Clusters for the Entities in PDB 1FOB

Entity #1 | Chains: A
BETA-1,4-GALACTANASE protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 36680
95 % 1 2 28973 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 27966
70 % 1 3 20274
50 % 1 6 5348
40 % 1 6 5036
30 % 1 6 4584

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1FOB 1 A BETA-1,4-GALACTANASE 5053 3.2.1.89 | Details
2 1HJS 1 A, B, C, D BETA-1,4-GALACTANASE 2-N-ACETYL-BETA-D-GLUCOSE(RESIDUE 601) LINKED TO ASN 111 IN THE FOUR MOLECULES 78579 3.2.1.89 | Details
3 4BF7 1 A ARABINOGALACTAN ENDO-1,4-BETA-GALACTOSIDASE A SULFIDE BRIDGES BETWEEN A C253-C310 162425 3.2.1.89 | Details
4 1HJU 1 A, B, C, D BETA-1,4-GALACTANASE 2-N-ACETYL-BETA-D-GLUCOSE(RESIDUE 601) LINKED TO ASN 111 IN THE FOUR MOLECULES 78579 3.2.1.89 | Details
5 1FHL 1 A BETA-1,4-GALACTANASE 5053 3.2.1.89 | Details
6 1HJQ 1 A BETA-1,4-GALACTANASE 2-N-ACETYL-BETA-D-GLUCOSE(A 601) LINKED TO ASN 111 (A 111) 34413 3.2.1.89 | Details