Sequence Similarity Clusters for the Entities in PDB 1FNX

Entity #1 | Chains: R
AU-RICH RNA ELEMENT rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: H
HU ANTIGEN C protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62035
95 % 1 1 43214
90 % 3 3 22505
70 % 5 5 11614
50 % 5 5 10367
40 % 8 8 4533
30 % 13 13 3102

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.