Sequence Similarity Clusters for the Entities in PDB 1FNX

Entity #1 | Chains: R
AU-RICH RNA ELEMENT rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: H
HU ANTIGEN C protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60246
95 % 1 1 41914
90 % 3 3 21762
70 % 5 5 11199
50 % 5 5 10036
40 % 8 8 4389
30 % 13 13 3022

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.