Sequence Similarity Clusters for the Entities in PDB 1FNV

Entity #1 | Chains: A,B,C,D
EXOTOXIN TYPE A PRECURSOR (ALLELE 1) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4016
95 % 7 8 1859 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 7 8 1900
70 % 7 8 1915
50 % 56 57 513
40 % 59 60 509
30 % 88 90 364

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures