Sequence Similarity Clusters for the Entities in PDB 1FNS

Entity #1 | Chains: L
IMMUNOGLOBULIN NMC-4 IGG1 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39635
95 % 9 52 554
90 % 10 66 372
70 % 309 1841 2
50 % 761 4537 1
40 % 761 4537 1
30 % 824 5342 1
Entity #2 | Chains: H
IMMUNOGLOBULIN NMC-4 IGG1 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58009
95 % 1 2 29698
90 % 1 9 7494
70 % 372 2197 1
50 % 762 4537 1
40 % 762 4537 1
30 % 825 5342 1
Entity #3 | Chains: A
VON WILLEBRAND FACTOR protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 27105
95 % 2 14 3447 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.0
PDBFlex
90 % 2 14 3497
70 % 2 15 3213
50 % 2 15 3140
40 % 2 15 3055
30 % 2 15 2866

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.