Sequence Similarity Clusters for the Entities in PDB 1FN4

Entity #1 | Chains: A,C
MONOCLONAL ANTIBODY AGAINST ACETYLCHOLINE RECEPTOR protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40870
95 % 1 1 31109 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 3 17955
70 % 1422 2287 1
50 % 2890 4633 1
40 % 2890 4633 1
30 % 3353 5461 1
Entity #2 | Chains: B,D
MONOCLONAL ANTIBODY AGAINST ACETYLCHOLINE RECEPTOR protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40171
95 % 1 1 30719 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 29514
70 % 1398 2244 2
50 % 2891 4633 1
40 % 2891 4633 1
30 % 3354 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.