Sequence Similarity Clusters for the Entities in PDB 1FN4

Entity #1 | Chains: A,C
MONOCLONAL ANTIBODY AGAINST ACETYLCHOLINE RECEPTOR protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41387
95 % 1 1 31496 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 3 18170
70 % 1477 2362 1
50 % 2998 4781 1
40 % 2998 4781 1
30 % 3476 5635 1
Entity #2 | Chains: B,D
MONOCLONAL ANTIBODY AGAINST ACETYLCHOLINE RECEPTOR protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40669
95 % 1 1 31093 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 29867
70 % 1446 2311 2
50 % 2999 4781 1
40 % 2999 4781 1
30 % 3477 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures