Sequence Similarity Clusters for the Entities in PDB 1FN4

Entity #1 | Chains: A,C
MONOCLONAL ANTIBODY AGAINST ACETYLCHOLINE RECEPTOR protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34524
95 % 1 1 29611 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 3 17262
70 % 1588 2553 1
50 % 3233 5180 1
40 % 3671 5834 1
30 % 4538 7269 1
Entity #2 | Chains: B,D
MONOCLONAL ANTIBODY AGAINST ACETYLCHOLINE RECEPTOR protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34525
95 % 1 1 29612 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 28420
70 % 1562 2511 2
50 % 3234 5180 1
40 % 3672 5834 1
30 % 4539 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures