Sequence Similarity Clusters for the Entities in PDB 1FN4

Entity #1 | Chains: A,C
MONOCLONAL ANTIBODY AGAINST ACETYLCHOLINE RECEPTOR protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42647
95 % 1 1 32379 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 3 18740
70 % 1553 2479 1
50 % 3154 5021 1
40 % 3154 5021 1
30 % 3696 5951 1
Entity #2 | Chains: B,D
MONOCLONAL ANTIBODY AGAINST ACETYLCHOLINE RECEPTOR protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41911
95 % 1 1 31969 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 30693
70 % 1523 2429 2
50 % 3155 5021 1
40 % 3155 5021 1
30 % 3697 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures