Sequence Similarity Clusters for the Entities in PDB 1FN3

Entity #1 | Chains: A,C
HEMOGLOBIN ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 214 254 12
95 % 224 265 16 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 224 265 17
70 % 269 332 17
50 % 631 754 4
40 % 636 759 7
30 % 1114 1293 6
Entity #2 | Chains: B,D
HEMOGLOBIN BETA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 185 214 42
95 % 218 250 20 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 222 255 21
70 % 287 346 14
50 % 632 754 4
40 % 637 759 7
30 % 1115 1293 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures