Sequence Similarity Clusters for the Entities in PDB 1FN3

Entity #1 | Chains: A,C
HEMOGLOBIN ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 179 214 23
95 % 208 245 19 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 209 246 21
70 % 264 327 15
50 % 621 744 4
40 % 626 749 8
30 % 1060 1201 8
Entity #2 | Chains: B,D
HEMOGLOBIN BETA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 135 164 51
95 % 213 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 217 250 19
70 % 282 341 13
50 % 622 744 4
40 % 627 749 8
30 % 1061 1201 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures