Sequence Similarity Clusters for the Entities in PDB 1FMX

Entity #1 | Chains: A,B
SACCHAROPEPSIN protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 10 6456
95 % 8 11 6139 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 8 11 6137
70 % 8 11 5990
50 % 8 11 5618
40 % 95 129 241
30 % 1017 1124 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures