Sequence Similarity Clusters for the Entities in PDB 1FMJ

Entity #1 | Chains: A,B
RETINOL DEHYDRATASE protein, length: 351 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 19388
95 % 2 5 7032 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 5 7023
70 % 2 5 6844
50 % 2 5 6359
40 % 2 5 5942
30 % 2 5 5336

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures