Sequence Similarity Clusters for the Entities in PDB 1FMA

Entity #1 | Chains: D
MOLYBDOPTERIN CONVERTING FACTOR, SUBUNIT 1 protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 14322
95 % 2 7 10993 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 2 7 10849
70 % 2 7 10298
50 % 2 7 9321
40 % 2 7 8523
30 % 2 7 7502
Entity #2 | Chains: E
MOLYBDOPTERIN CONVERTING FACTOR, SUBUNIT 2 protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 6743
95 % 2 5 7327 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 2 5 7288
70 % 2 5 7089
50 % 2 5 6543
40 % 2 5 6097
30 % 2 7 3788

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures