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THE 2.1 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THE HETERODIMER OF THE HUMAN RXRALPHA AND PPARGAMMA LIGAND BINDING DOMAINS RESPECTIVELY BOUND WITH 9-CIS RETINOIC ACID AND GI262570 AND CO-ACTIVATOR PEPTIDES.
Sequence Clustering and Redundancy Reduction Results
1FM9
Sequence Clusters for the Sequence Entities in PDB 1FM9
Entity #1: Chains: A - RETINOIC ACID RECEPTOR RXR-ALPHA protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 20 44 254
95% 20 47 336
90% 20 47 355
70% 20 56 255
50% 20 56 297
40% 24 69 263
30% 292 618 12
Entity #2: Chains: D - PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA protein, length: 272 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 39 119 41
95% 40 125 67
90% 40 125 71
70% 40 125 85
50% 51 162 76
40% 51 162 97
30% 293 618 12
Entity #3: Chains: B,E - STEROID RECEPTOR COACTIVATOR protein, length: 25 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 14 1071
95% 6 14 1477
90% 6 14 1525
70% 6 14 1556
50% 6 14 1629
40% 6 14 1665
30% 6 14 1614
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.