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An Information Portal to 110071 Biological Macromolecular Structures

THE 2.1 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THE HETERODIMER OF THE HUMAN RXRALPHA AND PPARGAMMA LIGAND BINDING DOMAINS RESPECTIVELY BOUND WITH 9-CIS RETINOIC ACID AND GI262570 AND CO-ACTIVATOR PEPTIDES.
Sequence Clustering and Redundancy Reduction Results
1FM9
Sequence Clusters for the Sequence Entities in PDB 1FM9
Entity #1: Chains: A - RETINOIC ACID RECEPTOR RXR-ALPHA protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 20 45 260
95% 20 48 355
90% 20 48 377
70% 20 57 299
50% 20 57 329
40% 24 70 288
30% 318 658 12
Entity #2: Chains: D - PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA protein, length: 272 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 44 128 58
95% 46 136 81
90% 46 136 84
70% 46 136 102
50% 57 174 99
40% 57 174 121
30% 319 658 12
Entity #3: Chains: B,E - STEROID RECEPTOR COACTIVATOR protein, length: 25 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 14 1237
95% 6 14 1677
90% 6 14 1720
70% 6 14 1742
50% 6 14 1780
40% 6 14 1807
30% 6 14 1724
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.