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An Information Portal to 111749 Biological Macromolecular Structures

THE 2.1 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THE HETERODIMER OF THE HUMAN RXRALPHA AND PPARGAMMA LIGAND BINDING DOMAINS RESPECTIVELY BOUND WITH 9-CIS RETINOIC ACID AND GI262570 AND CO-ACTIVATOR PEPTIDES.
Sequence Clustering and Redundancy Reduction Results
1FM9
Sequence Clusters for the Sequence Entities in PDB 1FM9
Entity #1: Chains: A - RETINOIC ACID RECEPTOR RXR-ALPHA protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 20 46 263
95% 20 49 355
90% 20 49 379
70% 20 58 307
50% 20 58 338
40% 24 71 288
30% 319 666 12
Entity #2: Chains: D - PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA protein, length: 272 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 44 129 58
95% 46 137 80
90% 46 137 84
70% 46 137 105
50% 57 175 99
40% 57 175 122
30% 320 666 12
Entity #3: Chains: B,E - STEROID RECEPTOR COACTIVATOR protein, length: 25 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 16 1104
95% 6 16 1514
90% 6 16 1549
70% 6 16 1575
50% 6 16 1622
40% 6 16 1650
30% 6 16 1575
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.