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An Information Portal to 108124 Biological Macromolecular Structures

THE 2.1 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THE HETERODIMER OF THE HUMAN RXRALPHA AND PPARGAMMA LIGAND BINDING DOMAINS RESPECTIVELY BOUND WITH 9-CIS RETINOIC ACID AND GI262570 AND CO-ACTIVATOR PEPTIDES.
Sequence Clustering and Redundancy Reduction Results
1FM9
Sequence Clusters for the Sequence Entities in PDB 1FM9
Entity #1: Chains: A - RETINOIC ACID RECEPTOR RXR-ALPHA protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 20 45 257
95% 20 48 349
90% 20 48 368
70% 20 57 293
50% 20 57 325
40% 24 70 283
30% 313 651 12
Entity #2: Chains: D - PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA protein, length: 272 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 127 52
95% 44 134 78
90% 44 134 81
70% 44 134 98
50% 55 172 79
40% 55 172 105
30% 314 651 12
Entity #3: Chains: B,E - STEROID RECEPTOR COACTIVATOR protein, length: 25 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 14 1212
95% 6 14 1641
90% 6 14 1686
70% 6 14 1708
50% 6 14 1752
40% 6 14 1778
30% 6 14 1704
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.