Sequence Similarity Clusters for the Entities in PDB 1FLT

Entity #1 | Chains: V,W
VASCULAR ENDOTHELIAL GROWTH FACTOR protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 30 408
95 % 6 35 453 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.9
PDBFlex
90 % 6 35 491
70 % 6 37 500
50 % 6 40 521
40 % 6 44 528
30 % 6 49 488
Entity #2 | Chains: X,Y
FMS-LIKE TYROSINE KINASE 1 protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 2660
95 % 1 9 3308 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 1 9 3352
70 % 1 9 3311
50 % 1 9 3218
40 % 1 9 3134
30 % 1 9 2934

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1FLT 2 X, Y FMS-LIKE TYROSINE KINASE 1 SECOND EXTRACELLULAR IGG LIKE DOMAIN, RESIDUES 129 - 229 9606 2.7.10.1 | Details
2 4CL7 1 A, B, C, D VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 1 DOMAIN-2, RESIDUES 132-225 9606 2.7.10.1 | Details
3 4CKV 1 X VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 1 DOMAIN-2, RESIDUES 132-225 9606 2.7.10.1 | Details
4 5ABD 1 E, I, X VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 1 DOMAIN-2, RESIDUES 132-226 9606 2.7.10.1 | Details
5 1RV6 2 X, Y FLT1 protein domain-2 9606 2.7.10.1 | Details
6 1QTY 2 T, U, X, Y FMS-LIKE TYROSINE KINASE 1 DOMAIN 2 9606 2.7.10.1 | Details
7 2XAC 2 C, X VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 1 DOMAIN 2, RESIDUES 129-226 9606 2.7.10.1 | Details
8 1QSZ 1 A VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 1 SECOND EXTRACELLULAR IMMUNOGLOBULIN-LIKE DOMAIN 9606 2.7.10.1 | Details
9 1QSV 1 A VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 1 SECOND EXTRACELLULAR IMMUNOGLOBULIN-LIKE DOMAIN 9606 2.7.10.1 | Details