Sequence Similarity Clusters for the Entities in PDB 1FLT

Entity #1 | Chains: V,W
VASCULAR ENDOTHELIAL GROWTH FACTOR protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 33 404
95 % 6 35 465 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.9
PDBFlex
90 % 6 35 500
70 % 6 37 514
50 % 6 40 534
40 % 6 44 544
30 % 6 49 500
Entity #2 | Chains: X,Y
FMS-LIKE TYROSINE KINASE 1 protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 2883
95 % 1 9 3203 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 1 9 3259
70 % 1 9 3207
50 % 1 9 3148
40 % 1 9 3064
30 % 1 9 2825

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1FLT 2 X, Y FMS-LIKE TYROSINE KINASE 1 SECOND EXTRACELLULAR IGG LIKE DOMAIN, RESIDUES 129 - 229 9606 2.7.10.1 | Details
2 4CL7 1 A, B, C, D VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 1 DOMAIN-2, RESIDUES 132-225 9606 2.7.10.1 | Details
3 4CKV 1 X VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 1 DOMAIN-2, RESIDUES 132-225 9606 2.7.10.1 | Details
4 5ABD 1 E, I, X VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 1 DOMAIN-2, RESIDUES 132-226 9606 2.7.10.1 | Details
5 1RV6 2 X, Y FLT1 protein domain-2 9606 2.7.10.1 | Details
6 1QTY 2 T, U, X, Y FMS-LIKE TYROSINE KINASE 1 DOMAIN 2 9606 2.7.10.1 | Details
7 2XAC 2 C, X VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 1 DOMAIN 2, RESIDUES 129-226 9606 2.7.10.1 | Details
8 1QSZ 1 A VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 1 SECOND EXTRACELLULAR IMMUNOGLOBULIN-LIKE DOMAIN 9606 2.7.10.1 | Details
9 1QSV 1 A VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 1 SECOND EXTRACELLULAR IMMUNOGLOBULIN-LIKE DOMAIN 9606 2.7.10.1 | Details