Sequence Similarity Clusters for the Entities in PDB 1FLT

Entity #1 | Chains: V,W
VASCULAR ENDOTHELIAL GROWTH FACTOR protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 30 385
95 % 6 35 403 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.9
PDBFlex
90 % 6 35 434
70 % 6 37 448
50 % 6 40 508
40 % 6 44 513
30 % 6 49 479
Entity #2 | Chains: X,Y
FMS-LIKE TYROSINE KINASE 1 protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 2582
95 % 1 9 3219 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 1 9 3265
70 % 1 9 3227
50 % 1 9 3145
40 % 1 9 3067
30 % 1 9 2876

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1MKK 1 A, B Vascular Endothelial Growth Factor A Residues 40-134, sequence database 9606
2 4GLS 1 A, B D- Vascular endothelial growth factor-A
3 4GLS 4 E, F Vascular endothelial growth factor A 9606
4 4KZN 1 A Vascular endothelial growth factor A receptor binding domain, UNP residues 39-135 9606
5 4GLN 2 E, F Vascular endothelial growth factor A 9606
6 1FLT 1 V, W VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR BINDING DOMAIN, RESIDUES 8 - 109 9606
7 3QTK 1 A, B, C, D, E, F Vascular endothelial growth factor A UNP residues 34-135 9606
8 4GLU 1 A, B, C, D, E, F D- Vascular endothelial growth factor-A D-ENANTIOMER
9 4QAF 2 C, D Vascular endothelial growth factor A UNP residues 34-135 9606
10 1VPP 1 V, W PROTEIN (VASCULAR ENDOTHELIAL GROWTH FACTOR) RECEPTOR BINDING DOMAIN 9606
11 2VPF 1 A, B, C, D, E, F, G, H VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR BINDING DOMAIN, RESIDUES 8 - 109 9606
12 1WQ9 1 A Vascular endothelial growth factor 8707
13 1WQ9 2 B Vascular endothelial growth factor 8707
14 1MJV 1 A, B Vascular Endothelial Growth Factor A Residues 40-134, Sequence Database 9606
15 5O4E 4 E, F Vascular endothelial growth factor A 9606
16 5HHD 1 A, B Vascular endothelial growth factor A 9606
17 5HHD 3 E, F D-Vascular endothelial growth factor 32630
18 1BJ1 3 V, W VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR BINDING DOMAIN 9606
19 3P9W 1 A, C, E, G Vascular endothelial growth factor A unp residues 7-110 9606
20 5HHC 1 A, B Vascular endothelial growth factor A 9606
21 1RV6 1 V, W placenta growth factor (PlGF) Receptor binding domain 9606
22 1CZ8 1 V, W Vascular endothelial growth factor A RECEPTOR BINDING FRAGMENT 9606
23 1VPF 1 A, B, C, D VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR BINDING DOMAIN, RESIDUES 8 - 109 9606
24 3BDY 3 V Vascular endothelial growth factor A sequence database residues 27-135 9606
25 1TZH 1 V, W Vascular endothelial growth factor A 9606
26 4ZFF 3 C, D Vascular endothelial growth factor A UNP residues 217-315 9606
27 3S1K 2 V, W Vascular endothelial growth factor A 9606
28 5FV1 2 V, W VASCULAR ENDOTHELIAL GROWTH FACTOR A VEGF RESIDUES 27-136 9606
29 1MKG 1 A, B, C, D Vascular Endothelial Growth Factor A Residues 40-134, sequence database 9606
30 2FJG 1 V, W Vascular endothelial growth factor A Receptor binding domain (residues 34-135) 9606
31 1QTY 1 R, S, V, W VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR BINDING DOMAIN 9606
32 1TZI 3 V Vascular endothelial growth factor A 9606
33 3S1B 1 V Vascular endothelial growth factor A 9606
34 2FJH 1 V, W Vascular endothelial growth factor A Receptor binding domain of VEGF (residues 34-135) 9606
35 4WPB 1 A, B Vascular endothelial growth factor A 9606
36 5FV2 2 V, W, X VASCULAR ENDOTHELIAL GROWTH FACTOR VEGF UNP RESIDUES 27-136 9606
37 3V2A 2 A Vascular endothelial growth factor A UNP residues 27-140 9606
38 2QR0 3 C, D, I, J, O, P, U, V Vascular endothelial growth factor A 9606
39 5T89 1 V, W Vascular endothelial growth factor A 9606
40 1KAT 1 V, W Vascular Endothelial Growth Factor Receptor Binding Domain 9606