Sequence Similarity Clusters for the Entities in PDB 1FLT

Entity #1 | Chains: V,W
VASCULAR ENDOTHELIAL GROWTH FACTOR protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 30 379
95 % 6 35 393 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.9
PDBFlex
90 % 6 35 425
70 % 6 37 441
50 % 6 40 504
40 % 6 44 510
30 % 6 49 475
Entity #2 | Chains: X,Y
FMS-LIKE TYROSINE KINASE 1 protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 2547
95 % 1 9 3186 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 1 9 3229
70 % 1 9 3201
50 % 1 9 3126
40 % 1 9 3048
30 % 1 9 2856

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.