Sequence Similarity Clusters for the Entities in PDB 1FLR

Entity #1 | Chains: L
4-4-20 (IG*G2A=KAPPA=) FAB FRAGMENT protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38042
95 % 26 147 153 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 29 162 147
70 % 314 2553 1
50 % 647 5180 1
40 % 802 5834 1
30 % 993 7269 1
Entity #2 | Chains: H
4-4-20 (IG*G2A=KAPPA=) FAB FRAGMENT protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40280
95 % 1 2 33967 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.9
PDBFlex
90 % 1 2 32490
70 % 315 2511 2
50 % 648 5180 1
40 % 803 5834 1
30 % 994 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures