Sequence Similarity Clusters for the Entities in PDB 1FLR

Entity #1 | Chains: L
4-4-20 (IG*G2A=KAPPA=) FAB FRAGMENT protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58808
95 % 26 145 147 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 29 155 149
70 % 267 2264 1
50 % 550 4587 1
40 % 550 4587 1
30 % 594 5392 1
Entity #2 | Chains: H
4-4-20 (IG*G2A=KAPPA=) FAB FRAGMENT protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39410
95 % 1 2 30153 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.9
PDBFlex
90 % 1 2 29001
70 % 268 2222 2
50 % 551 4587 1
40 % 551 4587 1
30 % 595 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.