Sequence Similarity Clusters for the Entities in PDB 1FLR

Entity #1 | Chains: L
4-4-20 (IG*G2A=KAPPA=) FAB FRAGMENT protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38850
95 % 26 147 164 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 29 162 150
70 % 326 2621 1
50 % 675 5323 1
40 % 835 6003 1
30 % 1028 7460 1
Entity #2 | Chains: H
4-4-20 (IG*G2A=KAPPA=) FAB FRAGMENT protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41091
95 % 1 2 34616 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.9
PDBFlex
90 % 1 2 33067
70 % 328 2580 2
50 % 676 5323 1
40 % 836 6003 1
30 % 1029 7460 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures