Sequence Similarity Clusters for the Entities in PDB 1FLR

Entity #1 | Chains: L
4-4-20 (IG*G2A=KAPPA=) FAB FRAGMENT protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61248
95 % 26 146 149 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 29 156 149
70 % 293 2416 1
50 % 602 4892 1
40 % 602 4892 1
30 % 653 5759 1
Entity #2 | Chains: H
4-4-20 (IG*G2A=KAPPA=) FAB FRAGMENT protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 41169
95 % 1 2 31456
90 % 1 2 30223
70 % 293 2366 2
50 % 603 4892 1
40 % 603 4892 1
30 % 654 5759 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures