Sequence Similarity Clusters for the Entities in PDB 1FLO

Entity #1 | Chains: E,G,I,K
SYMMETRIZED FRT DNA SITES dna, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: F,H,J,L
SYMMETRIZED FRT DNA SITES dna, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,B,C,D
FLP RECOMBINASE protein, length: 422 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24955
95 % 3 5 6497 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.9
PDBFlex
90 % 3 5 6482
70 % 3 5 6296
50 % 3 5 5868
40 % 3 5 5471
30 % 3 5 4805

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures