Sequence Similarity Clusters for the Entities in PDB 1FLL

Entity #1 | Chains: A,B
TNF RECEPTOR ASSOCIATED FACTOR 3 protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21679
95 % 2 2 18852 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 2 2 18444
70 % 2 2 17083
50 % 2 2 14841
40 % 2 2 13228
30 % 2 2 11332
Entity #2 | Chains: X,Y
B-CELL SURFACE ANTIGEN CD40 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51211
95 % 1 1 38295
90 % 1 1 36539
70 % 1 1 32490
50 % 1 1 27786
40 % 1 1 24593
30 % 1 1 20946

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures