Sequence Similarity Clusters for the Entities in PDB 1FLL

Entity #1 | Chains: A,B
TNF RECEPTOR ASSOCIATED FACTOR 3 protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21341
95 % 2 2 18580 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 2 2 18184
70 % 2 2 16860
50 % 2 2 14653
40 % 2 2 13067
30 % 2 2 11199
Entity #2 | Chains: X,Y
B-CELL SURFACE ANTIGEN CD40 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50572
95 % 1 1 37825
90 % 1 1 36100
70 % 1 1 32111
50 % 1 1 27478
40 % 1 1 24315
30 % 1 1 20712

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures