Sequence Similarity Clusters for the Entities in PDB 1FLL

Entity #1 | Chains: A,B
TNF RECEPTOR ASSOCIATED FACTOR 3 protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 20143
95 % 2 2 17593 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.1
PDBFlex
90 % 2 2 17222
70 % 2 2 15992
50 % 2 2 13941
40 % 2 2 12439
30 % 2 2 10653
Entity #2 | Chains: X,Y
B-CELL SURFACE ANTIGEN CD40 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48199
95 % 1 1 36104 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 1 1 34515
70 % 1 1 30817
50 % 1 1 26433
40 % 1 1 23399
30 % 1 1 19930

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.