Sequence Similarity Clusters for the Entities in PDB 1FL6

Entity #1 | Chains: A,L
ANTIBODY GERMLINE PRECURSOR TO 28B4 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21672
95 % 17 17 2316 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.9
PDBFlex
90 % 539 762 2
70 % 1704 2416 1
50 % 3455 4892 1
40 % 3455 4892 1
30 % 4060 5759 1
Entity #2 | Chains: B,H
ANTIBODY GERMLINE PRECURSOR TO 28B4 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21593
95 % 2 2 18760 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 2.0
PDBFlex
90 % 2 2 18329
70 % 1665 2366 2
50 % 3456 4892 1
40 % 3456 4892 1
30 % 4061 5759 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures