Sequence Similarity Clusters for the Entities in PDB 1FL6

Entity #1 | Chains: A,L
ANTIBODY GERMLINE PRECURSOR TO 28B4 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22492
95 % 18 18 2173 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.8
PDBFlex
90 % 549 780 2
70 % 1787 2553 1
50 % 3633 5180 1
40 % 4120 5834 1
30 % 5128 7269 1
Entity #2 | Chains: B,H
ANTIBODY GERMLINE PRECURSOR TO 28B4 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 24518
95 % 2 2 21732 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.5
PDBFlex
90 % 2 2 21075
70 % 1754 2511 2
50 % 3634 5180 1
40 % 4121 5834 1
30 % 5129 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures