Sequence Similarity Clusters for the Entities in PDB 1FL5

Entity #1 | Chains: A,L
ANTIBODY GERMLINE PRECURSOR TO ANTIBODY 28B4 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22025
95 % 6 18 1990 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.9
PDBFlex
90 % 286 788 2
70 % 910 2474 1
50 % 1859 5011 1
40 % 1859 5011 1
30 % 2120 5941 1
Entity #2 | Chains: B,H
ANTIBODY GERMLINE PRECURSOR TO ANTIBODY 28B4 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21943
95 % 1 2 19044 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 2.0
PDBFlex
90 % 1 2 18600
70 % 896 2424 2
50 % 1860 5011 1
40 % 1860 5011 1
30 % 2121 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures