Sequence Similarity Clusters for the Entities in PDB 1FKP

Entity #1 | Chains: A
HIV-1 RT, A-CHAIN protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 13 3291
95 % 113 228 103
90 % 113 228 107
70 % 113 228 120
50 % 114 229 147
40 % 114 229 163
30 % 114 229 182
Entity #2 | Chains: B
HIV-1 RT, B-CHAIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 12 4043
95 % 109 222 110
90 % 109 222 115
70 % 109 222 132
50 % 110 223 158
40 % 110 223 174
30 % 110 223 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.