Sequence Similarity Clusters for the Entities in PDB 1FKP

Entity #1 | Chains: A
HIV-1 RT, A-CHAIN protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 13 3223
95 % 109 223 104
90 % 109 223 109
70 % 109 223 123
50 % 110 224 149
40 % 110 224 165
30 % 110 224 181
Entity #2 | Chains: B
HIV-1 RT, B-CHAIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 12 3963
95 % 105 217 109
90 % 105 217 114
70 % 105 217 130
50 % 106 218 156
40 % 106 218 172
30 % 106 218 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.