Sequence Similarity Clusters for the Entities in PDB 1FKP

Entity #1 | Chains: A
HIV-1 RT, A-CHAIN protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 13 3542
95 % 119 236 104
90 % 119 236 108
70 % 119 236 123
50 % 120 237 149
40 % 120 237 166
30 % 120 237 183
Entity #2 | Chains: B
HIV-1 RT, B-CHAIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 12 4330
95 % 115 230 111
90 % 115 230 116
70 % 115 230 136
50 % 116 231 160
40 % 116 231 177
30 % 116 231 192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.