Sequence Similarity Clusters for the Entities in PDB 1FKO

Entity #1 | Chains: A
HIV-1 RT, A-CHAIN protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 13 3189
95 % 102 218 107
90 % 102 218 112
70 % 102 218 126
50 % 103 219 152
40 % 103 219 167
30 % 103 219 185
Entity #2 | Chains: B
HIV-1 RT, B-CHAIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 12 3928
95 % 98 212 113
90 % 98 212 117
70 % 98 212 135
50 % 99 213 164
40 % 99 213 175
30 % 99 213 191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.