Sequence Similarity Clusters for the Entities in PDB 1FKO

Entity #1 | Chains: A
HIV-1 RT, A-CHAIN protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 13 3291
95 % 106 228 103
90 % 106 228 107
70 % 106 228 120
50 % 107 229 147
40 % 107 229 163
30 % 107 229 182
Entity #2 | Chains: B
HIV-1 RT, B-CHAIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 12 4043
95 % 102 222 110
90 % 102 222 115
70 % 102 222 132
50 % 103 223 158
40 % 103 223 174
30 % 103 223 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.