Sequence Similarity Clusters for the Entities in PDB 1FKO

Entity #1 | Chains: A
HIV-1 RT, A-CHAIN protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 13 3261
95 % 103 224 104
90 % 103 224 109
70 % 103 224 123
50 % 104 225 150
40 % 104 225 168
30 % 104 225 183
Entity #2 | Chains: B
HIV-1 RT, B-CHAIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 12 4005
95 % 99 218 109
90 % 99 218 114
70 % 99 218 131
50 % 100 219 156
40 % 100 219 173
30 % 100 219 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.