Sequence Similarity Clusters for the Entities in PDB 1FKO

Entity #1 | Chains: A
HIV-1 RT, A-CHAIN protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 13 3088
95 % 102 216 99
90 % 102 216 104
70 % 102 216 120
50 % 103 217 149
40 % 103 217 162
30 % 103 217 181
Entity #2 | Chains: B
HIV-1 RT, B-CHAIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 12 3806
95 % 98 210 109
90 % 98 210 113
70 % 98 210 131
50 % 99 211 158
40 % 99 211 171
30 % 99 211 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.