Sequence Similarity Clusters for the Entities in PDB 1FKN

Entity #1 | Chains: A,B
MEMAPSIN 2 protein, length: 391 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 99 277 25
95 % 134 365 15 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.9
PDBFlex
90 % 134 365 16
70 % 134 365 24
50 % 136 377 41
40 % 136 377 56
30 % 689 1116 11
Entity #2 | Chains: C,D
inhibitor protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures