Sequence Similarity Clusters for the Entities in PDB 1FKN

Entity #1 | Chains: A,B
MEMAPSIN 2 protein, length: 391 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 94 272 19
95 % 128 354 14 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 128 354 15
70 % 128 354 25
50 % 130 366 37
40 % 130 366 49
30 % 130 366 66
Entity #2 | Chains: C,D
inhibitor protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.