Sequence Similarity Clusters for the Entities in PDB 1FKN

Entity #1 | Chains: A,B
MEMAPSIN 2 protein, length: 391 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 98 278 20
95 % 132 361 14 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 132 361 16
70 % 132 361 24
50 % 134 373 39
40 % 134 373 51
30 % 134 373 67
Entity #2 | Chains: C,D
inhibitor protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.