Sequence Similarity Clusters for the Entities in PDB 1FKA

Entity #1 | Chains: A
16S RIBOSOMAL RNA rna, length: 1518 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 71 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25082
95 % 214 247 21
90 % 214 247 26
70 % 214 247 37
50 % 250 337 27
40 % 250 338 38
30 % 250 338 54
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 49 566
95 % 185 205 63
90 % 185 205 66
70 % 185 205 75
50 % 185 205 109
40 % 185 205 129
30 % 185 205 145
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 211 242 15
95 % 211 242 26
90 % 211 242 31
70 % 211 242 42
50 % 244 327 34
40 % 244 327 44
30 % 244 327 60
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 207 232 27
95 % 210 240 28
90 % 210 240 34
70 % 210 240 44
50 % 243 324 36
40 % 243 325 45
30 % 243 325 62
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 210 239 22
95 % 210 239 33
90 % 210 239 38
70 % 210 239 47
50 % 244 328 33
40 % 244 328 43
30 % 244 330 59
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 212 244 13
95 % 218 250 20
90 % 218 250 25
70 % 218 250 35
50 % 218 250 70
40 % 218 250 94
30 % 235 289 80
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 211 243 14
95 % 211 244 25
90 % 211 244 29
70 % 211 244 40
50 % 232 289 50
40 % 232 290 62
30 % 232 290 83
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 239 19
95 % 209 239 31
90 % 211 243 30
70 % 211 243 41
50 % 246 330 31
40 % 247 332 41
30 % 268 401 37
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.