Sequence Similarity Clusters for the Entities in PDB 1FJS

Entity #1 | Chains: A
COAGULATION FACTOR XA protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 41 136 209
95 % 41 136 268 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 41 136 279
70 % 41 137 320
50 % 503 710 14
40 % 1075 1885 4
30 % 1081 1899 7
Entity #2 | Chains: L
COAGULATION FACTOR XA protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 68 555
95 % 24 68 691 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 24 68 717
70 % 24 68 764
50 % 24 69 806
40 % 51 120 489
30 % 77 154 387

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures