Sequence Similarity Clusters for the Entities in PDB 1FJS

Entity #1 | Chains: A
COAGULATION FACTOR XA protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 119 218
95 % 41 134 260 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 41 134 274
70 % 41 135 309
50 % 497 697 14
40 % 1000 1719 4
30 % 1068 1869 6
Entity #2 | Chains: L
COAGULATION FACTOR XA protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 66 515
95 % 24 66 705 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 24 66 736
70 % 24 66 778
50 % 24 67 814
40 % 51 118 469
30 % 51 118 464

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures