Sequence Similarity Clusters for the Entities in PDB 1FJE

Entity #1 | Chains: A
SNRE RNA rna, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
NUCLEOLIN RBD12 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 43032
95 % 2 2 32588
90 % 2 2 31149
70 % 3 3 20834
50 % 3 3 18028
40 % 3 3 16071
30 % 3 3 13739

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures