Sequence Similarity Clusters for the Entities in PDB 1FJE

Entity #1 | Chains: A
SNRE RNA rna, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
NUCLEOLIN RBD12 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 30943
95 % 2 2 26881
90 % 2 2 25903
70 % 3 3 19770
50 % 3 3 17372
40 % 3 3 15373
30 % 17 17 2631

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures