Sequence Similarity Clusters for the Entities in PDB 1FJ1

Entity #1 | Chains: A,C
HYBRIDOMA ANTIBODY LA2 (LIGHT CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40347
95 % 6 7 7703
90 % 7 8 6936
70 % 1495 2274 1
50 % 3033 4607 1
40 % 3033 4607 1
30 % 3544 5422 1
Entity #2 | Chains: B,D
HYBRIDOMA ANTIBODY LA2 (HEAVY CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40348
95 % 1 1 30734
90 % 1 1 29456
70 % 1467 2232 2
50 % 3034 4607 1
40 % 3034 4607 1
30 % 3545 5422 1
Entity #3 | Chains: E,F
OUTER SURFACE PROTEIN A protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26654
95 % 2 2 22291
90 % 19 19 2925
70 % 19 19 2904
50 % 19 19 2870
40 % 19 19 2830
30 % 19 19 2637

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.