Sequence Similarity Clusters for the Entities in PDB 1FJ1

Entity #1 | Chains: A,C
HYBRIDOMA ANTIBODY LA2 (LIGHT CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38285
95 % 6 7 7211
90 % 7 8 6501
70 % 1180 1750 2
50 % 2858 4268 1
40 % 2858 4268 1
30 % 3331 5034 1
Entity #2 | Chains: B,D
HYBRIDOMA ANTIBODY LA2 (HEAVY CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38286
95 % 1 1 29183
90 % 1 1 28013
70 % 1381 2064 1
50 % 2859 4268 1
40 % 2859 4268 1
30 % 3332 5034 1
Entity #3 | Chains: E,F
OUTER SURFACE PROTEIN A protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25233
95 % 2 2 21102
90 % 18 18 2953
70 % 18 18 2939
50 % 18 18 2870
40 % 18 18 2808
30 % 18 18 2637

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.