Sequence Similarity Clusters for the Entities in PDB 1FIV

Entity #1 | Chains: A
FIV PROTEASE protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 20536
95 % 6 9 5483 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 7 10 5193
70 % 7 10 5058
50 % 7 10 4828
40 % 392 719 8
30 % 394 721 12
Entity #2 | Chains: B
FIV PROTEASE INHIBITOR ACE-ALN-VAL-STA-GLU-ALN-NH2 protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures