Sequence Similarity Clusters for the Entities in PDB 1FIV

Entity #1 | Chains: A
FIV PROTEASE protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29345
95 % 6 9 5201 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 7 10 4918
70 % 7 10 4806
50 % 7 10 4607
40 % 381 705 9
30 % 383 707 14
Entity #2 | Chains: B
FIV PROTEASE INHIBITOR ACE-ALN-VAL-STA-GLU-ALN-NH2 protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.