Sequence Similarity Clusters for the Entities in PDB 1FIN

Entity #1 | Chains: A,C
CYCLIN-DEPENDENT KINASE 2 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 276 364 26
95 % 284 380 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 284 380 38
70 % 284 380 45
50 % 301 430 51
40 % 309 462 52
30 % 2360 4118 2
Entity #2 | Chains: B,D
CYCLIN A protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 83 181
95 % 41 105 154 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 45 109 160
70 % 45 109 177
50 % 45 109 219
40 % 45 109 243
30 % 48 115 253

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures