Sequence Similarity Clusters for the Entities in PDB 1FIG

Entity #1 | Chains: L
IGG1-KAPPA 1F7 FAB (LIGHT CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59252
95 % 9 20 2747 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.4
PDBFlex
90 % 87 145 141
70 % 1752 2264 1
50 % 3557 4587 1
40 % 3557 4587 1
30 % 4189 5392 1
Entity #2 | Chains: H
IGG1-KAPPA 1F7 FAB (HEAVY CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59134
95 % 1 1 41466
90 % 1 1 39515
70 % 1720 2222 2
50 % 3558 4587 1
40 % 3558 4587 1
30 % 4190 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.