Sequence Similarity Clusters for the Entities in PDB 1FIB

Entity #1 | Chains: A
GAMMA-FIBRINOGEN CARBOXYL TERMINAL FRAGMENT protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 13308
95 % 2 5 12595 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 1.3
PDBFlex
90 % 2 5 12401
70 % 2 5 11694
50 % 2 5 10441
40 % 11 41 553
30 % 12 42 539

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures