Sequence Similarity Clusters for the Entities in PDB 1FI8

Entity #1 | Chains: A,B
NATURAL KILLER CELL PROTEASE 1 protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39331
95 % 1 1 30233 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 29143
70 % 2 7 3127
50 % 23 34 1010
40 % 1380 1684 4
30 % 1488 1833 6
Entity #2 | Chains: C,E
ECOTIN protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47452
95 % 1 1 35444 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 33867
70 % 1 1 30139
50 % 1 1 25773
40 % 1 1 22732
30 % 1 1 19254
Entity #3 | Chains: D,F
ECOTIN protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48324
95 % 1 1 36109
90 % 1 1 34499
70 % 1 1 30700
50 % 1 1 26256
40 % 1 1 23184
30 % 1 1 19675

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.