Sequence Similarity Clusters for the Entities in PDB 1FI8

Entity #1 | Chains: A,B
NATURAL KILLER CELL PROTEASE 1 protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38773
95 % 1 1 29780
90 % 1 1 28719
70 % 2 7 3089
50 % 23 34 1002
40 % 1378 1682 4
30 % 1486 1831 6
Entity #2 | Chains: C,E
ECOTIN protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46856
95 % 1 1 34997
90 % 1 1 33458
70 % 1 1 29835
50 % 1 1 25548
40 % 1 1 22534
30 % 1 1 19081
Entity #3 | Chains: D,F
ECOTIN protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47722
95 % 1 1 35656 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 34084
70 % 1 1 30390
50 % 1 1 26027
40 % 1 1 22982
30 % 1 1 19496

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.